Rna Polymerase


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ProfDistS  v.0.9.9

ProfDistS analyze RNA secondary structures. Profile Neighbor Joining (PNJ) as implemented in ProfDist is computationally efficient in reconstructing very large trees. Besides the huge amount of sequence data the structure is important in RNA alignment ...

ReverseComplement  v.1.8

Analyze DNA or RNA sequence. ReverseComplement is a simple tool for determining the reverse, complement, and reverse complement of DNA and RNA sequences.Requirements:
* Java ...





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RNAfamily  v.1.0

View RNA secondary structure with this tool. RNAfamily is a simple program tools that enables to display all secondary structures of a family of RNA molecules. It uses the linear backbone representation. RNAfamily provides usual graphical features: zooming, ...

Locomotif  v.1.0

Locomotif: Localization of RNA motifs with generated thermodynamic Matchers. A GUI-based software that allows for the visual design of RNA motifs. The graphical structures are then translated into executable programs to be used for searching a motif in ...

RNApasta  v.0.9

RNApasta is a Java software to calculate a variety of useful statistics related to RNA stem-loop and pseudoknot structures. It will also perform a functions related to alignment editing, primarily the generation of subsets of data where the original data ...

Suitename  v.0.3.070628

RNA analysis made easy. Suitename is a new C software that supports the ROC RNA Ontology Consortium consensus RNA backbone nomenclature and conformer-list development (see our RNA backbone rotamer section.From dihedral-angle input for a specific RNA structure ...

SSalign  v.1.0

SSalign is a DNA/RNA alignment program. This software was developed due to a need to look at all possible stem-loop structures that a large number of DNA/RNA sequences could form. Aligning each sequence with its reverse using available programs proved ...

Ekonomibloggar  v.1.0.0.0

Ekonomibloggar är en app som gör det lättare att följa några av de största privata ekonomibloggarna i Sverige.

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SRNA Workbench 2.5.0 Beta  v.1.0

RNA silencing is a complex, highly-conserved, transcriptional and post-transcriptional mechanism that tunes gene expression. RNA silencing is mediated by molecules known as small RNAs (sRNAs). Well-known examples of sRNAs include short-interfering RNA ...

IRNAi  v.2.1

Nowadays, the use of so-called RNA interference is a common technique applied by molecular biologists to determine the function of the many genes in our genome.Unfortunately, the design of oligonucleotides, the building blocks for this technique, is a ...

MacVector  v.10.5

MacVector.. Researchers who want a simple but comprehensive desktop sequence analysis application continually turn to MacVector, the leading sequence analysis package for the Macintosh. MacVector provides sequence editing, primer design, Internet database ...

BARNACLE  v.0.21

BARNACLE is a Python library for RNA 3D structure prediction. It can be used for probabilistic sampling of RNA structures that are compatible with a given nucleotide sequence and that are RNA like on a local length scale.

Biomolecule Toolkit  v.0.8.1

The Biomolecule Toolkit is a library for modeling biological macromolecules such as proteins, DNA and RNA. It provides a C++ interface for common tasks in structural biology to facilitate the development of molecular modeling, design and analysis tools.

GTfold  v.1.19

A Scalable Multicore Code for RNA Secondary Structure Prediction ...

RnaCoFold  v.1.0

The software implements a fast optimal co-folding of pairs of RNA sequences. The algorithm is described in details in the paper "A faster algorithm for RNA co-folding" by Ziv-Ukelson, Gat-Viks, Wexler, and Shamir.

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