Software Developed by bibiserv.techfak.uni-bielefeld.de
R2cat v.1.0
Related reference based contig arrangement tool. The software r2cat has two main objectives: 1.Match a set of contigs to a related reference genome to order and orient the contigs based on that reference. The mapping is visualized in an interactive
Locomotif v.1.0
Locomotif: Localization of RNA motifs with generated thermodynamic Matchers. A GUI-based software that allows for the visual design of RNA motifs.
JPREdictor v.1.23
jPREdictor was developed foremost for the prediction of cis-regulatory elements. Short sequence fragments, namely transcription factor binding sites, are known to be enriched and clustered in such elements.
GEvolutionS v.1.0
Genome evolution simulation software. GEvolutionS can simulates an evolutionary Genome rearrangement scenario with different genome rearrange operations.
ChromA (Chromatogram Alignment) v.0.9
Chromatogram Alignment for Chromatography-Mass Spectrometry is a web based tool for the alignment and visualization of data from Chromatography-Mass Spectrometry.Consider the case of a Metabolomics experiment,
CEGeD v.1.0
CEGeD computes the Inversion distance, the Translocation distance and the Double-Cut-and-Join distance of genomes. The genome data can be read from files or typed in manually in the program. The comparisons are shown as text and as graphic,