Dna Sequence Generator
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DASYLab v.11.0.0
DASYLab is full set of modules inclusive the complete signal analysis tools and sequence generator. After the acquisition of the data, the measurement values are filtered and scaled. The measurement values can then be presented in tables and charts with ...
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DnaSP v.5.10.0001
DnaSP, DNA Sequence Polymorphism, is a software package for the analysis of nucleotide polymorphism from aligned DNA sequence data. DnaSP can estimate several measures of DNA sequence variation within and between populations (in noncoding, synonymous ...
Collapse v.1.2
Describing haplotypes from sequence alignments. COLLAPSE is a simple tool for collapsing sequences to haplotypes (unique sequences). It can read DNA sequence alignments in NEXUS or PHYLIP "sequential" format. The software indicates which sequences belong ...
AmbiguityRemover v.1.0
DNA sequence analysis made easy. AmbiguityRemover test protein sequence data for substitutional asymmetry using the technique described in McDonald et al. (1999). Under the neutral model of protein evolution, a comparison of sequences from two species ...
PhyDE v.0.997
View and analyze DNA sequence alignments with this tool. PhyDE (Phylogenetic Data Editor) is a system-independent editor for DNA and amino acid sequence alignments, designed to assist anybody interested in phylogenetic or other comparative analyses of ...
JCAT (Java Codon Adaptation Tool) v.1.0
DNA sequence analysis made easy. The CodonAdaptationTool (JCAT) presents a simple method to adapt the Codon Usage to most sequenced prokaryotic organisms and selected eukaryotic organisms. The codon adaptation plays a major role in cases where foreign ...
ProSeq v.3.2
ProSeq stands for "Processor of sequences" and that's what it is - a software to handle ("process") DNA sequence data.ProSeq was developed to facilitate routine work involved in preparation of DNA sequence polymorphism datasets, from the very first steps ...
ACT (The Artemis Comparison Tool) v.9.0
ACT (The Artemis Comparison Tool) is a DNA sequence comparison viewer written in Java. It is based on the program for Artemis, the genome viewer and annotation tool. ACT runs on UNIX, GNU/Linux, Macintosh and MS Windows systems. It can read complete EMBL ...
GenCompress v.1.0
DNA sequence compression made easy. GenCompress is an efficient compression algorithm for DNA sequences. Data compression has became a software to retrieve information hidden in genetic sequences.Usage : GenCompress original.dat [-c reference.dat] [-o ...
ORF Extractor v.1.0
Analyze DNA sequences with this software. ORF Extractor help you extract Open Reading Frame from DNA sequences.
Open Reading Frame, ORF for short is a DNA sequence that does not contain a stop codon in a given reading frame.
SeqWord Sniffer v.1.0
SeqWord Sniffer is a Genomic DNA sequence automatic searcher, do an automatic search in genomic DNA sequences for loci enriched with the horizontally transferred elements, fitness genes, giant genes, genes for ribosomal RNA and proteins. Give SeqWord ...
GCut v.1.1
DNA restriction analysis made easy. gCut is a software for restriction analysis in a DNA sequence. gCut will find the restriction sites of a given enzyme (tetra and hexa enzymes only) and performs the cut. gCut is written in python, compatible with FASTA ...
GenomeComp v.1.3
Genome wide sequence analysis made easy. GenomeComp is a DNA sequence comparison tool and graphical user interface (GUI) viewer implemented in Perl/Tk. It can read one, two or three input sequences in either of FASTA, GENBANK or EMBL format, then it runs ...
SITES v.1.0
SITES is a computer software for the analysis of comparative DNA sequence data. Basic analyses include: data summaries by polymorphism class; polymorphism estimates within and between groups (species); estimates of migration, neutral model, and recombination ...