Software Developed by udel.edu

SliderPrep  v.1.0

Analyze aligned DNA sequences with this tool. SliderPrep can take aligned DNA sequences and create the input file for DNA Slider. It creates a list of polymorphisms and fixed differences, classified as synonymous, non-coding,

DNA Slider  v.1.0

DNA Slider is software for performing four significance tests of heterogeneity in the ratio of polymorphic sites to fixed differences in DNA sequence data. It is available for classic Macintosh, Mac OS X, and Windows.

AsymmetryScaler  v.1.0

AsymmetryScaler create asymmetry index fast and easy, take the substitution matrix produced by AsymmetryCounter and produces an asymmetry index,

AsymmetryCounter  v.1.0

Count number of substitutions in each direction for amino acids pairs. AsymmetryCounter can test protein sequence data for substitutional asymmetry using the technique described in McDonald et al. (1999). Under the neutral model of protein evolution,

AmbiguityRemover  v.1.0

DNA sequence analysis made easy. AmbiguityRemover test protein sequence data for substitutional asymmetry using the technique described in McDonald et al. (1999). Under the neutral model of protein evolution,

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