Quickchange Primer Design
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ORFprimer - primer design for ORFs v.1.0
ORFprimer is an extended software package for high throughput PCR primer design for biological sequences ...
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Primer Premier v.6 10
Primer Premier is a comprehensive primer design application.PCR primer design- design primer pairs for PCR and multiplex experiments.Cross species- Amplify sequences from multiple species.Pathogenic detection- Locate oligos in highly conserved regions.
JCVI Primer Designer v.20101122
This is the high throughput PCR primer design software that is used at the J. Craig Venter Institute. See: Li K, et al. "Novel computational methods for increasing PCR primer design effectiveness in directed sequencing". BMC Bioinformatics 2008, 9:191.
NoePrimer v.2.03
NoePrimer is designed specifically to meet the growing demand for simplifying increasingly complex primer searches in versatile molecular applications. It provides an easy, simple, graphics-enhanced sequence view for primer design. In addition to supporting ...
PerlPrimer v.1. 1. 2020
It aims to automate and simplify the process of primer design.
PerlPrimer's current features include the following:
- Calculation of possible primer-dimers
- Retrieval of genomic or cdna sequences from Ensembl (including both ...
Clone Manager Professional v.9 2
Clone Manager Professional provides a comprehensive, fully integrated set of tools for enzyme operations, cloning simulation, graphic map drawing, primer design and analysis, global and local sequence alignments, similarity searches, and laboratory-sized ...
SeqState v.1.4.1
SeqState offer you a primer design, sequence statistics, and indel coding according to various schemes.Requirements:
* Java ...
Sequence Analysis v.1.6
Sequence editing, reverse complement, protein translation, ORF finding, secondary structure, composition, isoelectric point, primer design, pairwise comparison, publish layout, sequence reformatting. Fetches sequence entries directly from the NCBI via ...
AlleleID v.7.01
With ClustalW multiple sequence alignment at its core, AlleleID can design species specific/cross species probes for microarrays or TaqMan®/molecular beacon qPCR assays. You could use both the techniques; verify microarray results using qPCR, or perhaps, ...
Intron marker pipeline v.1.0
IMP is an automated tool for intron-flanking primer design based off of Expressed Sequence Tags (ESTs). It's intended for use in species with limited to no genomic sequence data available.
Beacon Designer v.7 91
Beacon Designer™ automates the design of real time primers and probes. It is used by molecular biologists worldwide to design successful real time PCR assays.
It saves the time and the money involved in failed experiments. Beacon Designer™ ...
DNASIS MAX v.3.0
Features:
- Launch analyses with a single click
- Edit multiple sequences simultaneously
- Easily add sequences with the new sequence input wizard
- Import numerous file formats
- Display DNA Auto-Sequencer trace files alongside your sequences
- Homology search
- Multiple alignment
- Restriction enzyme site search
- Primer/Probe design
...
Gene Designer v.2.0.162
Capture you entire gene design process in one efficient application, using a range of design tools purposely built for the task:
- Intelligent, fast, and easy-to-use algorithms for in silico cloning, codon optimization, back translation ...
MB DNA Analysis v.6.84
primer design (self-hybridisation, combination of 2 primers and homology search within a given sequence)
11. open reading frame search for all sense and antisense frames
12. molecular weight calculation for single-stranded and double-stranded ...