Proteolytic Enzymes


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AMORSS: redox enzymes simulation system  v.1.0

This project is A Mitochondrial OxydoReduction Simulation System. It consists of two linked projects: a program for displaying and analysing large biomolecular systems (Floral) and a multi-agent simulator for biomolecular oxydoreduction systems (AMORSS).

Nutrition  v.5.1

Registration provides full access to all 250+ Afflictions in the Nutritional Therapy database, an Therapeutic Index, detailed Nutrient listings with food sources (Amino Acids, Antioxidants, Carbohydrates, Enzymes, Fats and Oils, Minerals, Vitamins), ...





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Blast2KEGG  v.1.0 Alpha

Blast2KEGG picks the enzymes from predicated genes, and performs fuzzy matching from enzyme name to EC number. It is consisted of a KEGG viewer, an annotation editor, and a genome browser. It is useful in the study of the evidence of member genes in ...

GCut  v.1.1

gCut will find the restriction sites of a given enzyme (tetra and hexa enzymes only) and performs the cut. gCut is written in python, compatible with FASTA format sequences, and can analyse sequences of any size.Features:
1. DNA restriction analysis
2.

Glycolysis  v.1.0.0.0

A revision aid for glycolysis detailing the reaction pathway, and showing enzymes responsible for controling the pathway. Perfect for A-Level biology students or students undertaking a degree in biochemistry or a related subject.

EnzymeX  v.3.1

EnzymeX is a program for molecular biologists, developed to help you determine which restriction enzymes you should use to cut your DNA of interest. It now is a complete DNA sequence analysis and editing program, which contains powerful and unique features ...

RFLP planner  v.12

Find restriction enzymes that help differ known homologe DNA sequences (RFLP). Simulate electrophoresis gels. Usefull to investigate the diversity of a population by one of their common genes. Written in perl, uses bioperl modules and the GD library.

DynaFit  v.3.28.070

The main purpose of the program DynaFit is to perform nonlinear least-squares regression of chemical kinetic, enzyme kinetic, or ligand-receptor binding data. The experimental data can be either initial reaction velocities in dependence on the concentration ...

Primer Premier  v.6 10

Restriction enzyme and motif analysis- Select from the database of over 800 enzymes and 200 common motifs.Clustal W alignments- Load the aligned sequences after performing ClustalW alignment using any resource, including EBI.Multiple sequence alignment- ...

Unipro UGENE  v.1. 9. 2002



Main features:

Integrated tools

-Multiple sequence alignment using MUSCLE 3, KAlign, Clustal;
-HMM profiles build and search, based on the source of HMMER 2 and HMMER 3;
-PCR Primers design using Primer 3;
-Cloning in silico capabilities;
-Queries to NCBI BLAST and CDD databases;
-Protein secondary structure prediction using GOR IV and PSIPRED;
-Phylogenetic analysis with Phylip;
-Search for restriction enzymes and integration ...

Gene Construction Kit  v.3.0.4.401

Gene Construction Kit automatically monitors sticky ends that can be generated by restriction enzymes. Incompatible ends cannot inadvertently be pasted together. If such an attempt is made, GCK utilizes a unique 'ligation dialog' to assist users in adjusting ...

Clone Manager Professional  v.9 2

Clone Manager Professional provides a comprehensive, fully integrated set of tools for enzyme operations, cloning simulation, graphic map drawing, primer design and analysis, global and local sequence alignments, similarity searches, and laboratory-sized ...

PDRAW32  v.1.1.110

This software allows you to edit the sequence in various ways,lets you select which restriction enzymes to plot in the graphical output and much more ...

UGENE  v.1.9.8

Search for restriction enzymes and integration with REBASE;
7. Extremely fast repeat finder;
8. DNA reference assembly using Bowtie;
9. Search for transcription factor binding sites using SITECON;
10. Protein back translation;
11.

MB DNA Analysis  v.6.84

mapping of enzymes' cut positions on the map
5. capability to save all restriction analysis reports into one HTM file
6. multiple sequence alignment (method of hierarchical clustering), various amino acid substitution matrices are included, comparisson ...

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